CDS

Accession Number TCMCG057C60512
gbkey CDS
Protein Id XP_018466982.1
Location join(65..112,201..306,387..532,703..816)
Gene LOC108838560
GeneID 108838560
Organism Raphanus sativus

Protein

Length 137aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018611480.1
Definition PREDICTED: pectin acetylesterase 11-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category M
Description Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties
KEGG_TC -
KEGG_Module -
KEGG_Reaction R11202        [VIEW IN KEGG]
KEGG_rclass RC00020        [VIEW IN KEGG]
RC00041        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K19882        [VIEW IN KEGG]
EC 3.1.1.98        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04310        [VIEW IN KEGG]
map04310        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009505        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0052689        [VIEW IN EMBL-EBI]
GO:0052793        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAAACACCACTTTTCGTAATCAATGCCGCCTTCGATTCTTGGCAGATCAAGAATGTTTTGGCTCCAACCTCTGTTGATAAACGCAAAGAGTGGAAGGATTGTAAGCTTGATCTTAAGAAGTGTACAGCCGCTCAGCTTCAAACCGTTCAAGGGTATAGAGACCAAATGTTGGCTGCGTTGGCACCTGTTCAAGCAACGACGACTAGCGGATTATTCCTAGATTCATGCCACGCTCATTGCCAAGGTGGAAGTGCAGCCACTTGGTCCGGTGCTCAAGGCCCACAAGTCGGCAATACGAAAATGGCAAAAGCAGTTGGAGACTGGTTTTATGAGCGGAGTACATTTCAGAACATAGATTGTCCATCCTTGAATTGCAACCCTACTTGTCCTGCAGTATCTACTGAAGAATAA
Protein:  
MQTPLFVINAAFDSWQIKNVLAPTSVDKRKEWKDCKLDLKKCTAAQLQTVQGYRDQMLAALAPVQATTTSGLFLDSCHAHCQGGSAATWSGAQGPQVGNTKMAKAVGDWFYERSTFQNIDCPSLNCNPTCPAVSTEE